Lecture 16 - Symbiosis - Custom Scholars
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Lecture 16 – Symbiosis

question
symbiosis
answer

“together living” (sym-together; bio and biosis-living) -> it means when two organisms (of different species) are living together in a close relationship.

question
humans do not have a symbiotic relationship
answer

If two parents are living together and raising children, that’s not symbiosis.

Symbiosis - we’re talking about organisms of different species that have come together for some reason, usually at least one of them benefiting from that.

question
normal microbiota
answer

Resident microbiota and transient microbiota

Microbiota refers to microbes that live on the human body.

question
resident microbiota
answer
present throughout long phases of life
question
Transient microbiota
answer
only sometimes present and comes and goes (hours, days, weeks)
question
mutualism
answer
both organisms in this relationship benefit
question
commensalism
answer
one partner benefits and the other partner is unaffected
question
parasitism
answer
one partner benefits (parasite), one partner is harmed (host)
question
mutualism: lichens
answer

Algae are doing photosynthesis to produce food for themselves from the sun and make enough for the fungus as well.The fungal hyphae are surrounding the algae so that they can absorb food.

In return, fungus (lichens) is providing them with a habitat and protection

question
symbiotic microbes are normally found
answer
in the digestive tract
question
axenic
answer
Means no foreign organisms present in that body part.
question
microbial antagonism
answer

the competition between normal microbes and pathogens for nutrients and space.

importance: reinforces the body’s defense by limiting the ability of pathogens to colonize the skin and mucous membranes

question
organisms found on the skin
answer

Staphylococcus, micrococcus (uv resistant)

Most are considered commensal

Propionibacterium

Not commensal

question

propionibacterium

answer

Produces propionic acid but they are also the major cause of acne.

This organism can be somewhat of a parasite.

question
difficult to distinguish between commensalism and mutualism
answer

Because while it can be pretty easy to prove that one partner is getting a benefit, it can be very challenging to prove that the other partner is not getting a benefit or a harm.

“Commensal” bacteria may compete with pathogens for food and space - this is a benefit but not a clear and specific benefit.

question
organisms found in the mouth
answer

Streptococcus, other LAB

- S. mutans most responsible for dental plaque

*S. salivarius - some strains of this that are used as oral probiotics fight S. mutans

- Other LAB can decay teeth with acid

question
where microbes are found in the gastrointestinal tract
answer

Intestines have very high microbial growth -> colon/large instestine

Anaerobic environment

question
microbes in GI tract
answer

Lactobacilli

Enterococci

Enterobacteria

Enterococcus faecalis

Bacteroides

Bifidobacterium

Eubacterium

Peptococcus

Peptostreptococcus

Ruminococcus

Clostridia

question
environment of GI tract influence microbes
answer
Stomach, there's not gonna be much, only the most acid tolerant like lactobacilli

Duodenum in terms of pH, starting to neutralize but it's still going to be very acidic

Jejunum - closer to neutral, more microbes but not too much diversity until you get to ileum
More neutral in large intestine, much diversity of microbes

Important: stomach acid will kill most of the microbes that come through here but not all so if anything does survive, it's going to be able to get into here and colonize the space -> IT ONLY TAKES ONE CELL TO REPRODUCE
question
germ free mice
answer

are delivered by aseptic Caesarian-section and raised in sterile environment

- Very susceptible to infection

- Poor nutrient absorption

- Require high vitamin diets

question
contributions of bacteria shown by germ free mice experiment
answer
We can infer that normal microbes protect against infection, help with nutrient absorption/digestion, and help with vitamins.
question
e.coli and human mutualism
answer

Benefit one another

E.coli benefit: residence in colon and absorb nutrients from the intestine

Human benefit: e.coli kills other bacteria that can be dangerous and protect from infection; e.coli also produces vitamins K and B

question
bacteriocin
answer
Chemicals produced by e. coli that kill closely related bacteria such as Salmonella, Shigella and other E.coli.
question
opportunistic pathogen
answer
Normal microbes that cause disease if:

Conditions preventing their growth are removed and/or
They colonize a new area of the body
question
C. diff as an opportunistic pathogen
answer
when C.diff is normally there but then the person takes antibiotics and kills off the organisms that were inhibiting C.diff so then now C.diff is able to grow and so it becomes a pathogen when given the opportunity
question
conditions C. diff causes
answer
diarrhea and colitis
question
e. coli as an opportunistic pathogen
answer

is an opportunistic pathogen if they colonize a new area of the body.

Most strains of this in the gut are commensal to mutualistic (beneficial/neutral). However, if they get from the gut into the urinary tract, they can cause UTIs.

question
where microbes are found in the female urinary-genital system
answer
Vagina, lower portion of the urethra, skin on the outside
question
where microbes are found in the male urinary-genital system
answer
Lower portion of the urethra
question
UTI
answer

where bacteria are found: urethra

which bacteria are found in the urethra: e.coli

question
why females have more UTIs
answer
because they have a shorter urethra so the ability of a microbe to make its way from the outside up into the bladder doesn't have to go as far in a female as it does in a male
question
candida albicans
answer
Causes yeast infection
question
interactions between humans, lactobacillus acidophilus, c. albicans and antibiotics
answer

Healthy populations of Lactobacillus prevent bacterial vaginosis (C. albicans)

Antibiotics can disrupt healthy vaginal microbiota

Decreased lactobacillus = higher chance of bacterial vaginosis

question
where microbes are found in the respiratory tract
answer
Nose, throat, and trachea, prolly the bronchi as well
question
Why microbes rarely found in other parts of the respiratory tract
answer

lungs are axenic

1. Ciliary escalator: epithelial lining of the respiratory tract and it removes microbes

- Pseudostratified ciliated columnar epithelium

*Ciliated cells

*Goblet cells - produce sticky mucus

2. Things (bacteria, etc) you breathe are gonna get stuck in mucus

3. Ciliated cells are gonna push whatever is trapped in the mucus as well as the mucus up up and up out of the respiratory tract into the throat

4. Once the mucus gets up to the throat, usually it gets swallowed down into the stomach where the stomach acid will destroy it

5. In the alveoli, we have macrophages so that if something does happen to bypass the ciliary escalator and get all the way into the alveoli, these macrophages are waiting for them and they will attack and kill most things that get there

1 of 35
question
symbiosis
answer

“together living” (sym-together; bio and biosis-living) -> it means when two organisms (of different species) are living together in a close relationship.

question
humans do not have a symbiotic relationship
answer

If two parents are living together and raising children, that’s not symbiosis.

Symbiosis - we’re talking about organisms of different species that have come together for some reason, usually at least one of them benefiting from that.

question
normal microbiota
answer

Resident microbiota and transient microbiota

Microbiota refers to microbes that live on the human body.

question
resident microbiota
answer
present throughout long phases of life
question
Transient microbiota
answer
only sometimes present and comes and goes (hours, days, weeks)
question
mutualism
answer
both organisms in this relationship benefit
question
commensalism
answer
one partner benefits and the other partner is unaffected
question
parasitism
answer
one partner benefits (parasite), one partner is harmed (host)
question
mutualism: lichens
answer

Algae are doing photosynthesis to produce food for themselves from the sun and make enough for the fungus as well.The fungal hyphae are surrounding the algae so that they can absorb food.

In return, fungus (lichens) is providing them with a habitat and protection

question
symbiotic microbes are normally found
answer
in the digestive tract
question
axenic
answer
Means no foreign organisms present in that body part.
question
microbial antagonism
answer

the competition between normal microbes and pathogens for nutrients and space.

importance: reinforces the body’s defense by limiting the ability of pathogens to colonize the skin and mucous membranes

question
organisms found on the skin
answer

Staphylococcus, micrococcus (uv resistant)

Most are considered commensal

Propionibacterium

Not commensal

question

propionibacterium

answer

Produces propionic acid but they are also the major cause of acne.

This organism can be somewhat of a parasite.

question
difficult to distinguish between commensalism and mutualism
answer

Because while it can be pretty easy to prove that one partner is getting a benefit, it can be very challenging to prove that the other partner is not getting a benefit or a harm.

“Commensal” bacteria may compete with pathogens for food and space - this is a benefit but not a clear and specific benefit.

question
organisms found in the mouth
answer

Streptococcus, other LAB

- S. mutans most responsible for dental plaque

*S. salivarius - some strains of this that are used as oral probiotics fight S. mutans

- Other LAB can decay teeth with acid

question
where microbes are found in the gastrointestinal tract
answer

Intestines have very high microbial growth -> colon/large instestine

Anaerobic environment

question
microbes in GI tract
answer

Lactobacilli

Enterococci

Enterobacteria

Enterococcus faecalis

Bacteroides

Bifidobacterium

Eubacterium

Peptococcus

Peptostreptococcus

Ruminococcus

Clostridia

question
environment of GI tract influence microbes
answer
Stomach, there's not gonna be much, only the most acid tolerant like lactobacilli

Duodenum in terms of pH, starting to neutralize but it's still going to be very acidic

Jejunum - closer to neutral, more microbes but not too much diversity until you get to ileum
More neutral in large intestine, much diversity of microbes

Important: stomach acid will kill most of the microbes that come through here but not all so if anything does survive, it's going to be able to get into here and colonize the space -> IT ONLY TAKES ONE CELL TO REPRODUCE
question
germ free mice
answer

are delivered by aseptic Caesarian-section and raised in sterile environment

- Very susceptible to infection

- Poor nutrient absorption

- Require high vitamin diets

question
contributions of bacteria shown by germ free mice experiment
answer
We can infer that normal microbes protect against infection, help with nutrient absorption/digestion, and help with vitamins.
question
e.coli and human mutualism
answer

Benefit one another

E.coli benefit: residence in colon and absorb nutrients from the intestine

Human benefit: e.coli kills other bacteria that can be dangerous and protect from infection; e.coli also produces vitamins K and B

question
bacteriocin
answer
Chemicals produced by e. coli that kill closely related bacteria such as Salmonella, Shigella and other E.coli.
question
opportunistic pathogen
answer
Normal microbes that cause disease if:

Conditions preventing their growth are removed and/or
They colonize a new area of the body
question
C. diff as an opportunistic pathogen
answer
when C.diff is normally there but then the person takes antibiotics and kills off the organisms that were inhibiting C.diff so then now C.diff is able to grow and so it becomes a pathogen when given the opportunity
question
conditions C. diff causes
answer
diarrhea and colitis
question
e. coli as an opportunistic pathogen
answer

is an opportunistic pathogen if they colonize a new area of the body.

Most strains of this in the gut are commensal to mutualistic (beneficial/neutral). However, if they get from the gut into the urinary tract, they can cause UTIs.

question
where microbes are found in the female urinary-genital system
answer
Vagina, lower portion of the urethra, skin on the outside
question
where microbes are found in the male urinary-genital system
answer
Lower portion of the urethra
question
UTI
answer

where bacteria are found: urethra

which bacteria are found in the urethra: e.coli

question
why females have more UTIs
answer
because they have a shorter urethra so the ability of a microbe to make its way from the outside up into the bladder doesn't have to go as far in a female as it does in a male
question
candida albicans
answer
Causes yeast infection
question
interactions between humans, lactobacillus acidophilus, c. albicans and antibiotics
answer

Healthy populations of Lactobacillus prevent bacterial vaginosis (C. albicans)

Antibiotics can disrupt healthy vaginal microbiota

Decreased lactobacillus = higher chance of bacterial vaginosis

question
where microbes are found in the respiratory tract
answer
Nose, throat, and trachea, prolly the bronchi as well
question
Why microbes rarely found in other parts of the respiratory tract
answer

lungs are axenic

1. Ciliary escalator: epithelial lining of the respiratory tract and it removes microbes

- Pseudostratified ciliated columnar epithelium

*Ciliated cells

*Goblet cells - produce sticky mucus

2. Things (bacteria, etc) you breathe are gonna get stuck in mucus

3. Ciliated cells are gonna push whatever is trapped in the mucus as well as the mucus up up and up out of the respiratory tract into the throat

4. Once the mucus gets up to the throat, usually it gets swallowed down into the stomach where the stomach acid will destroy it

5. In the alveoli, we have macrophages so that if something does happen to bypass the ciliary escalator and get all the way into the alveoli, these macrophages are waiting for them and they will attack and kill most things that get there

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